Publications

Researchers who use The GHSU Cancer Center resources, including the Integrated Genomics Core, must include recognition of Cancer Center membership on all cancer-related academic papers, grants, journal articles, poster sessions and/or abstracts.

 

Publications Resulting from Microarray Facility Use

 

1. Hawthorn, L. and Cowell, J. K. (2011). Analysis of Wilms tumors using SNP mapping array-based comparative genomic hybridization. PLoS.One. 6: e18941.
   
   
2. Rath, P., Miller, D. C., Litofsky, N. S., Anthony, D. C., Feng, Q., Franklin, C., Pei, L., Free, A., Liu, J., Ren, M., Kirk, M. D., and Shi, H. (2011. Isolation and characterization of a population of stem-like progenitor cells from an atypical meningioma. Exp.Mol.Pathol. 90: 179-188.
   
   
3. Ren, M., Qin, H., Ren, R., Tidwell, J., and Cowell, J. K. (12-1-2011). Src activation plays an important key role in lymphomagenesis induced by FGFR1 fusion kinases. Cancer Res. 71: 7312-7322.
   
   
4. Teng, Y., Liu, M., and Cowell, J. K. (12-15-2011). Functional interrelationship between the WASF3 and KISS1 metastasis-associated genes in breast cancer cells. Int.J.Cancer 129: 2825-2835.
   
   
5. Ren, M. and Cowell, J. K. (6-23-2011). Constitutive Notch pathway activation in murine ZMYM2-FGFR1-induced T-cell lymphomas associated with atypical myeloproliferative disease. Blood 117: 6837-6847.
   
   
6. Sharma, S., Free, A., Mei, Y., Peiper, S. C., Wang, Z., and Cowell, J. K. (2010). Distinct molecular signatures in pediatric infratentorial glioblastomas defined by aCGH. Exp.Mol.Pathol. 89: 169-174.
   
   
7. Mao, L., Ding, J., Perdue, A., Yang, L., Zha, Y., Ren, M., Huang, S., Cui, H., and Ding, H. F. (11-28-2011). Cyclin E1 is a common target of BMI1 and MYCN and a prognostic marker for neuroblastoma progression. Oncogene.
   
   
8. Mao, L., Ding, J., Zha, Y., Yang, L., McCarthy, B. A., King, W., Cui, H., and Ding, H. F. (6-15-2011). HOXC9 links cell-cycle exit and neuronal differentiation and is a prognostic marker in neuroblastoma. Cancer Res. 71: 4314-4324.
   
   
9. Sharma, S., Free, A., Mei, Y., Peiper, S. C., Wang, Z., and Cowell, J. K. (2010). Distinct molecular signatures in pediatric infratentorial glioblastomas defined by aCGH. Exp.Mol.Pathol. 89: 169-174.
   
   
10. Cowell, J. K., Lo, K. C., Luce, J., and Hawthorn, L. (2010). Interpreting aCGH-defined karyotypic changes in gliomas using copy number status, loss of heterozygosity and allelic ratios. Exp.Mol.Pathol. 88: 82-89.
    
    
11. Kunapuli, P., Lo, K., Hawthorn, L., and Cowell, J. K. (2010). Reexpression of LGI1 in glioma cells results in dysregulation of genes implicated in the canonical axon guidance pathway. Genomics 95: 93-100.
    
    
12. Hawthorn, L., Luce, J., Stein, L., and Rothschild, J. (2010). Integration of transcript expression, copy number and LOH analysis of infiltrating ductal carcinoma of the breast. BMC.Cancer 10: 460.
    
    
13. Mojica, W. and Hawthorn, L. (2010). Normal colon epithelium: a dataset for the analysis of gene expression and alternative splicing events in colon disease. BMC.Genomics 11: 5.
    
    
14. Yang, L., Cui, H., Wang, Z., Zhang, B., Ding, J., Liu, L., and Ding, H. F. (2010). Loss of negative feedback control of nuclear factor-kappaB2 activity in lymphocytes leads to fatal lung inflammation. Am.J.Pathol. 176: 2646-2657.

 

Publications Resulting from NGS Resource Use

1. Lee, E. J., Pei, L., Srivastava, G., Joshi, T., Kushwaha, G., Choi, J. H., Robertson, K. D., Wang, X., Colbourne, J. K., Zhang, L., Schroth, G. P., Xu, D., Zhang, K., and Shi, H. (2011). Targeted bisulfite sequencing by solution hybrid selection and massively parallel sequencing. Nucleic Acids Res. 39: e127.